python - fatal error : cuda_runtime_api. h:尝试在 docker 中使用 cuda 时没有这样的文件或目录

标签 python docker ubuntu cuda nvidia

我正在尝试为要部署的 python 脚本构建一个 docker 镜像。
这是我第一次使用 docker,所以我可能做错了什么,但我不知道是什么。
我的系统:

OS: Ubuntu 20.04
docker version: 19.03.8
我正在使用这个 Dockerfile:
# Dockerfile
FROM nvidia/cuda:11.0-base

COPY . /SingleModelTest

WORKDIR /SingleModelTest

RUN nvidia-smi

RUN set -xe \           #these are just to make sure pip and git are installed to install the requirements
    && apt-get update \
    && apt-get install python3-pip -y \
    && apt-get install git -y 
RUN pip3 install --upgrade pip

RUN pip3 install -r requirements/requirements1.txt
RUN pip3 install -r requirements/requirements2.txt    #this is where it fails

ENTRYPOINT ["python"]

CMD ["TabNetAPI.py"]
nvidia-smi 的输出符合预期:
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 450.80.02    Driver Version: 450.80.02    CUDA Version: 11.0     |
|-------------------------------+----------------------+----------------------+
| GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
| Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
|                               |                      |               MIG M. |
|===============================+======================+======================|
|   0  GeForce GTX 1050    Off  | 00000000:01:00.0  On |                  N/A |
|  0%   54C    P0    N/A /  90W |   1983MiB /  1995MiB |     18%      Default |
|                               |                      |                  N/A |
+-------------------------------+----------------------+----------------------+
                                                                               
+-----------------------------------------------------------------------------+
| Processes:                                                                  |
|  GPU   GI   CI        PID   Type   Process name                  GPU Memory |
|        ID   ID                                                   Usage      |
|=============================================================================|
+-----------------------------------------------------------------------------+
所以 cuda 确实可以工作,但是当我尝试从需求文件中安装所需的软件包时,会发生这种情况:
     command: /usr/bin/python3 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/SingleModelTest/src/mmdet/setup.py'"'"'; __file__='"'"'/SingleModelTest/src/mmdet/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' develop --no-deps
         cwd: /SingleModelTest/src/mmdet/
    Complete output (24 lines):
    running develop
    running egg_info
    creating mmdet.egg-info
    writing mmdet.egg-info/PKG-INFO
    writing dependency_links to mmdet.egg-info/dependency_links.txt
    writing requirements to mmdet.egg-info/requires.txt
    writing top-level names to mmdet.egg-info/top_level.txt
    writing manifest file 'mmdet.egg-info/SOURCES.txt'
    reading manifest file 'mmdet.egg-info/SOURCES.txt'
    writing manifest file 'mmdet.egg-info/SOURCES.txt'
    running build_ext
    building 'mmdet.ops.utils.compiling_info' extension
    creating build
    creating build/temp.linux-x86_64-3.8
    creating build/temp.linux-x86_64-3.8/mmdet
    creating build/temp.linux-x86_64-3.8/mmdet/ops
    creating build/temp.linux-x86_64-3.8/mmdet/ops/utils
    creating build/temp.linux-x86_64-3.8/mmdet/ops/utils/src
    x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DWITH_CUDA -I/usr/local/lib/python3.8/dist-packages/torch/include -I/usr/local/lib/python3.8/dist-packages/torch/include/torch/csrc/api/include -I/usr/local/lib/python3.8/dist-packages/torch/include/TH -I/usr/local/lib/python3.8/dist-packages/torch/include/THC -I/usr/local/cuda/include -I/usr/include/python3.8 -c mmdet/ops/utils/src/compiling_info.cpp -o build/temp.linux-x86_64-3.8/mmdet/ops/utils/src/compiling_info.o -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=compiling_info -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++11
    mmdet/ops/utils/src/compiling_info.cpp:3:10: fatal error: cuda_runtime_api.h: No such file or directory
        3 | #include <cuda_runtime_api.h>
          |          ^~~~~~~~~~~~~~~~~~~~
    compilation terminated.
    error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
    ----------------------------------------
ERROR: Command errored out with exit status 1: /usr/bin/python3 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/SingleModelTest/src/mmdet/setup.py'"'"'; __file__='"'"'/SingleModelTest/src/mmdet/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' develop --no-deps Check the logs for full command output.
失败的包是 mmdetection。
我正在使用 2 个单独的需求文件来确保某些软件包在其他软件包之前安装,以防止依赖失败
要求1.txt:
torch==1.4.0+cu100 
-f https://download.pytorch.org/whl/torch_stable.html
torchvision==0.5.0+cu100 
-f https://download.pytorch.org/whl/torch_stable.html
numpy==1.19.2
要求2.txt:
addict==2.3.0
albumentations==0.5.0
appdirs==1.4.4
asynctest==0.13.0
attrs==20.2.0
certifi==2020.6.20
chardet==3.0.4
cityscapesScripts==2.1.7
click==7.1.2
codecov==2.1.10
coloredlogs==14.0
coverage==5.3
cycler==0.10.0
Cython==0.29.21
decorator==4.4.2
flake8==3.8.4
Flask==1.1.2
humanfriendly==8.2
idna==2.10
imagecorruptions==1.1.0
imageio==2.9.0
imgaug==0.4.0
iniconfig==1.1.1
isort==5.6.4
itsdangerous==1.1.0
Jinja2==2.11.2
kiwisolver==1.2.0
kwarray==0.5.9
MarkupSafe==1.1.1
matplotlib==3.3.2
mccabe==0.6.1
mmcv==0.4.3
-e git+https://github.com/open-mmlab/mmdetection.git@0f33c08d8d46eba8165715a0995841a975badfd4#egg=mmdet
networkx==2.5
opencv-python==4.4.0.44
opencv-python-headless==4.4.0.44
ordered-set==4.0.2
packaging==20.4
pandas==1.1.3
Pillow==6.2.2
pluggy==0.13.1
py==1.9.0
pycocotools==2.0.2
pycodestyle==2.6.0
pyflakes==2.2.0
pyparsing==2.4.7
pyquaternion==0.9.9
pytesseract==0.3.6
pytest==6.1.1
pytest-cov==2.10.1
pytest-runner==5.2
python-dateutil==2.8.1
pytz==2020.1
PyWavelets==1.1.1
PyYAML==5.3.1
requests==2.24.0
scikit-image==0.17.2
scipy==1.5.3
Shapely==1.7.1
six==1.15.0
terminaltables==3.1.0
tifffile==2020.9.3
toml==0.10.1
tqdm==4.50.2
typing==3.7.4.3
ubelt==0.9.2
urllib3==1.25.11
Werkzeug==1.0.1
xdoctest==0.15.0
yapf==0.30.0
我用来(尝试)构建图像的命令:nvidia-docker build -t firstdockertestsinglemodel:latest我尝试过的事情:
  • 设置 cuda 环境变量,如 CUDA_HOME、LIBRARY_PATH、LD_LIBRARY_PATH,但我不确定我是否正确,因为我无法检查我设置的路径,因为我在 Ubuntu Files 应用程序中看不到它们

  • 我将非常感谢任何人可以提供的任何帮助。
    如果我需要提供更多信息,我很乐意提供。

    最佳答案

    感谢@Robert Crovella,我解决了我的问题。
    原来我只需要使用nvidia/cuda/10.0-devel作为基础图像而不是 nvidia/cuda/10.0-base所以我的 Dockerfile 现在是:

    # Dockerfile
    FROM nvidia/cuda:10.0-devel
    
    RUN nvidia-smi
    
    RUN set -xe \
        && apt-get update \
        && apt-get install python3-pip -y \
        && apt-get install git -y 
    RUN pip3 install --upgrade pip
    
    WORKDIR /SingleModelTest
    
    COPY requirements /SingleModelTest/requirements
    
    RUN export LD_LIBRARY_PATH=/usr/local/cuda-10.0/lib64
    
    RUN pip3 install -r requirements/requirements1.txt
    RUN pip3 install -r requirements/requirements2.txt
    
    
    COPY . /SingleModelTest
    
    ENTRYPOINT ["python"]
    
    CMD ["TabNetAPI.py"]
    

    关于python - fatal error : cuda_runtime_api. h:尝试在 docker 中使用 cuda 时没有这样的文件或目录,我们在Stack Overflow上找到一个类似的问题: https://stackoverflow.com/questions/64481487/

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