当在超过一定数据大小(~2,5gb)的集群上运行sparkJob时,我收到“作业被取消,因为SparkContext被关闭”或“执行程序丢失”。当查看yarn gui时,我发现被杀死的工作是成功的。运行500mb的数据没有问题。我正在寻找解决方案并发现: - “似乎 yarn 杀死了一些执行器,因为它们请求的内存比预期更多。”
有什么建议如何调试吗?
命令我提交我的 Spark 作业:
/opt/spark-1.5.0-bin-hadoop2.4/bin/spark-submit --driver-memory 22g --driver-cores 4 --num-executors 15 --executor-memory 6g --executor-cores 6 --class sparkTesting.Runner --master yarn-client myJar.jar jarArguments
和sparkContext设置
val sparkConf = (new SparkConf()
.set("spark.driver.maxResultSize", "21g")
.set("spark.akka.frameSize", "2011")
.set("spark.eventLog.enabled", "true")
.set("spark.eventLog.enabled", "true")
.set("spark.eventLog.dir", configVar.sparkLogDir)
)
失败的简化代码看起来像这样
val hc = new org.apache.spark.sql.hive.HiveContext(sc)
val broadcastParser = sc.broadcast(new Parser())
val featuresRdd = hc.sql("select "+ configVar.columnName + " from " + configVar.Table +" ORDER BY RAND() LIMIT " + configVar.Articles)
val myRdd : org.apache.spark.rdd.RDD[String] = featuresRdd.map(doSomething(_,broadcastParser))
val allWords= featuresRdd
.flatMap(line => line.split(" "))
.count
val wordQuantiles= featuresRdd
.flatMap(line => line.split(" "))
.map(word => (word, 1))
.reduceByKey(_ + _)
.map(pair => (pair._2 , pair._2))
.reduceByKey(_+_)
.sortBy(_._1)
.collect
.scanLeft((0,0.0)) ( (res,add) => (add._1, res._2+add._2) )
.map(entry => (entry._1,entry._2/allWords))
val dictionary = featuresRdd
.flatMap(line => line.split(" "))
.map(word => (word, 1))
.reduceByKey(_ + _) // here I have Rdd of word,count tuples
.filter(_._2 >= moreThan)
.filter(_._2 <= lessThan)
.filter(_._1.trim!=(""))
.map(_._1)
.zipWithIndex
.collect
.toMap
和错误堆栈
Exception in thread "main" org.apache.spark.SparkException: Job cancelled because SparkContext was shut down
at org.apache.spark.scheduler.DAGScheduler$$anonfun$cleanUpAfterSchedulerStop$1.apply(DAGScheduler.scala:703)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$cleanUpAfterSchedulerStop$1.apply(DAGScheduler.scala:702)
at scala.collection.mutable.HashSet.foreach(HashSet.scala:79)
at org.apache.spark.scheduler.DAGScheduler.cleanUpAfterSchedulerStop(DAGScheduler.scala:702)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onStop(DAGScheduler.scala:1511)
at org.apache.spark.util.EventLoop.stop(EventLoop.scala:84)
at org.apache.spark.scheduler.DAGScheduler.stop(DAGScheduler.scala:1435)
at org.apache.spark.SparkContext$$anonfun$stop$7.apply$mcV$sp(SparkContext.scala:1715)
at org.apache.spark.util.Utils$.tryLogNonFatalError(Utils.scala:1185)
at org.apache.spark.SparkContext.stop(SparkContext.scala:1714)
at org.apache.spark.scheduler.cluster.YarnClientSchedulerBackend$MonitorThread.run(YarnClientSchedulerBackend.scala:146)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:567)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1813)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1826)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1839)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1910)
at org.apache.spark.rdd.RDD.count(RDD.scala:1121)
at sparkTesting.InputGenerationAndDictionaryComputations$.createDictionary(InputGenerationAndDictionaryComputations.scala:50)
at sparkTesting.Runner$.main(Runner.scala:133)
at sparkTesting.Runner.main(Runner.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:672)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:120)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
最佳答案
找到答案了。
我的表被保存为 20gb avro 文件。当执行者试图打开它时。他们每个人都必须将 20GB 加载到内存中。通过使用 csv 而不是 avro 解决了这个问题
关于scala - 在大型数据集上运行 Spark 时出现 "sparkContext was shut down",我们在Stack Overflow上找到一个类似的问题: https://stackoverflow.com/questions/32822948/