我有 id 列表(第 2 列),我根据它们的值(第 3 列)对这些 id 进行了从 1 到 600 的排名。我有另一个相同 id 的列表,但具有不同的排名,因为它们的值不同。如何将 file2 中的第一秒 id 列表与 file1 中的第一个 id 列表进行比较?例如:
file1:
rank list-of-ids values
1 HOUSAM69708729 0.4468
2 HOCANM106363549 0.4434
3 HOCANM10845509 0.4268
4 HOCANM11098662 0.4203
5 HOUSAM68571374 0.3896
6 HOUSAM69990251 0.3895
7 HONLDM716072164 0.3893
8 HOUSAM69756113 0.3656
9 HOCANM11098658 0.3593
10 HOUSAM66626020 0.3538
file2:
list-of-ids values
HOCANM106363549 0.4832
HOUSAM69708729 0.4199
HOCANM10845509 0.4143
HOUSAM69990251 0.3887
HOCANM11098662 0.3792
HOUSAM69756113 0.365
HOUSAM68571374 0.3649
HONLDM716072164 0.3600
HOUSAM66626020 0.3593
HOCANM11098658 0.3545
输出文件应该是 file2,其排名来自 file1:
output:
rank list-of-ids values
2 HOCANM106363549 0.4832
1 HOUSAM69708729 0.4199
3 HOCANM10845509 0.4143
6 HOUSAM69990251 0.3887
4 HOCANM11098662 0.3792
8 HOUSAM69756113 0.365
5 HOUSAM68571374 0.3649
7 HONLDM716072164 0.3600
10 HOUSAM66626020 0.3593
9 HOCANM11098658 0.3545
请问有什么建议吗?请注意,实际数据没有任何 header ,因此输出也不应该有 header 。
最佳答案
另一种选择,使用'join'
$ join -1 2 -2 1 -o 1.1,2.1,2.2 <(sort -k 2 file1) <(sort -k 1 file2)
2 HOCANM106363549 0.4832
3 HOCANM10845509 0.4143
9 HOCANM11098658 0.3545
4 HOCANM11098662 0.3792
7 HONLDM716072164 0.3600
10 HOUSAM66626020 0.3593
5 HOUSAM68571374 0.3649
1 HOUSAM69708729 0.4199
8 HOUSAM69756113 0.365
6 HOUSAM69990251 0.3887
ranks list-of-ids values
诚然,这并不能非常干净地处理 header 。您已经接受了一个解决方案,但我喜欢这个实用程序,但没有多少人知道它;)
编辑:如果源数据没有任何标题,那么此命令效果很好:
$ cat file1
1 HOUSAM69708729 0.4468
2 HOCANM106363549 0.4434
3 HOCANM10845509 0.4268
4 HOCANM11098662 0.4203
5 HOUSAM68571374 0.3896
6 HOUSAM69990251 0.3895
7 HONLDM716072164 0.3893
8 HOUSAM69756113 0.3656
9 HOCANM11098658 0.3593
10 HOUSAM66626020 0.3538
$ cat file2
HOCANM106363549 0.4832
HOUSAM69708729 0.4199
HOCANM10845509 0.4143
HOUSAM69990251 0.3887
HOCANM11098662 0.3792
HOUSAM69756113 0.365
HOUSAM68571374 0.3649
HONLDM716072164 0.3600
HOUSAM66626020 0.3593
HOCANM11098658 0.3545
$ join -1 2 -2 1 -o 1.1,2.1,2.2 <(sort -k 2 file1) <(sort -k 1 file2)
2 HOCANM106363549 0.4832
3 HOCANM10845509 0.4143
9 HOCANM11098658 0.3545
4 HOCANM11098662 0.3792
7 HONLDM716072164 0.3600
10 HOUSAM66626020 0.3593
5 HOUSAM68571374 0.3649
1 HOUSAM69708729 0.4199
8 HOUSAM69756113 0.365
6 HOUSAM69990251 0.3887
如果您的任何一个文件确实包含 header ,那么您只需在“排序”之前将其 grep 出来即可:
$ cat file1
ranks list-of-ids values
1 HOUSAM69708729 0.4468
2 HOCANM106363549 0.4434
3 HOCANM10845509 0.4268
4 HOCANM11098662 0.4203
5 HOUSAM68571374 0.3896
6 HOUSAM69990251 0.3895
7 HONLDM716072164 0.3893
8 HOUSAM69756113 0.3656
9 HOCANM11098658 0.3593
10 HOUSAM66626020 0.3538
$ cat file2
list-of-ids values
HOCANM106363549 0.4832
HOUSAM69708729 0.4199
HOCANM10845509 0.4143
HOUSAM69990251 0.3887
HOCANM11098662 0.3792
HOUSAM69756113 0.365
HOUSAM68571374 0.3649
HONLDM716072164 0.3600
HOUSAM66626020 0.3593
HOCANM11098658 0.3545
$ join -1 2 -2 1 -o 1.1,2.1,2.2 <(grep -v "list-of-ids" file1 | sort -k 2) <(grep -v "list-of-ids" file2 | sort -k 1)
2 HOCANM106363549 0.4832
3 HOCANM10845509 0.4143
9 HOCANM11098658 0.3545
4 HOCANM11098662 0.3792
7 HONLDM716072164 0.3600
10 HOUSAM66626020 0.3593
5 HOUSAM68571374 0.3649
1 HOUSAM69708729 0.4199
8 HOUSAM69756113 0.365
6 HOUSAM69990251 0.3887
关于linux - 如何通过将 ids 列表与 LINUX 中的另一个数据文件进行比较来给予 ids 列表相同的排名?,我们在Stack Overflow上找到一个类似的问题: https://stackoverflow.com/questions/45986169/